Publications: Papers, Posters, Presentations
| Accepted Papers | ||
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| 2008 | 1. | Utah’s statewide Informatics Platform for Translational and Clinical Science Rocha RA, Hurdle JF, Matney S, Narus SP, Meystre S, LaSalle B, Deshmukh V, Hunter C, Mineau GP, Facelli JC, Mitchell JA. AMIA Annu Symp Proc. 2008 Nov. 6:1114. PubMed PMID: 18999122. http://www.ncbi.nlm.nih.gov/pubmed/18999122 |
| 2009 | 2. | Architecture of a Federated Query Engine for Heterogeneous Resources Bradshaw RL, Matney S, Livne OE, Bray BE, Mitchell JA, Narus SP. AMIA Annu Symp Proc. 2009 Nov 14;2009:70-4. PubMed PMID: 20351825; PubMed Central PMCID: PMC2815441. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2815441/ |
| 2010 | 3. | Integrating a Federated Healthcare Data Query Platform With Electronic IRB Information Systems He S, Hurdle JF, Botkin JR, Narus SP. AMIA Annu Symp Proc. 2010 Nov 13;2010:291-5. PubMed PMID: 21346987; PubMed Central PMCID: PMC3041360. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3041360/ |
| 4. | Federated querying architecture for clinical & translational health IT Livne OE, Schultz ND, Narus SP. Proceedings of the 1st ACM International Health Informatics Symposium [Internet]. New York, NY, USA: ACM; 2010 [cited 2013 Sep 14]. p. 250–6. Available from: http://doi.acm.org/10.1145/1882992.1883028 |
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| 2011 | 5. | Federating Clinical Data From Six Pediatric Hospitals: Process and Initial Results from the PHIS+ Consortium Narus SP, Srivastava R, Gouripeddi R, Livne OE, Mo P, Bickel JP, de Regt D, Hales JW, Kirkendall E, Stepanek RL, Toth J, Keren R. AMIA Annu Symp Proc. 2011;2011:994-1003. Epub 2011 Oct 22. PubMed PMID: 22195159; PubMed Central PMCID: PMC3243196. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3243196/ |
| 6. | Federated Querying Architecture with Clinical & Translational Health IT Application Livne OE, Schultz ND, Narus SP. J Med Syst. 2011 Oct;35(5):1211-24. Epub 2011 May 3. PubMed PMID: 21537849. http://link.springer.com/article/10.1007/s10916-011-9720-3/fulltext.html |
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| 7. | Developing a Semantic Framework for Clinical and Translational Research Matney SA, Bradshaw RL, Livne OE, Bray BE, Mitchell JA, Narus SP. 2011 AMIA Summit on Translational Bioinformatics, San Francisco. http://proceedings.amia.org/16pc81/16pc81/1# |
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| 2012 | 8. | Federating Clinical Data from Six Pediatric Hospitals: Process and Initial Results for Microbiology from the PHIS+ Consortium R. Gouripeddi, P. Warner, P. Mo, J. E. Levin, R. Srivastava, S. S. Shah, D. de Regt, E. Kirkendall, J. Bickel, E. K. Korgenski, M. Precourt, R. L. Stepanek, J. A. Mitchell, S. P. Narus, R. Keren, (2012). AMIA 2012 Annual Symposium Proceedings, November 3 -7, 2012, Proposal ID: AMIA-0205-A2012. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3540481/ |
| 2013 | 9. | Biobanking Informatics Infrastructure to Support Clinical and Translational Research Bernie LaSalle, Michael Varner, Jeff Botkin, Marc Jackson, Louisa Stark, Melissa Cessna, Carolyn Orthner, Nathan Hulse, Aldo Bernasconi, Randy Madsen, Dustin Schultz, Richard Bradshaw, Joyce Mitchell Spring AMIA Clinical Research Informatics Symposium 2013 Presentation: AMIA_CRI_2013.pdf AMIA_CRI_2013.pptx AMIA-0205-A2012. http://proceedings.amia.org/3dbh7q/3dbh7q/1 |
| 10. | Use of Standardized Terminologies in Federating Clinical Data from Six Pediatric Hospitals for Comparative Effectiveness Research: Lessons Learned from the PHIS+ Consortium Ramkiran Gouripeddi, MBBS, MS, Ryan Butcher, MS, MBA, Phillip B. Warner, MS, Peter Mo, MS, Lauren D. Tanzer, MS, PMP, Rajendu Srivastava, MD, FRCP(C), MPH, Ron Keren, MD, MPH; Electronic Data Methods (EDM) Forum Annual Symposium 2013 |
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| Accepted Posters | ||
| 2009 | 1. | Adapting and Adopting caBIG Standards to Achieve Interoperability for Heterogeneous Systems. Matney S, Bradshaw RL, Livne OE, Bray BE, Narus SP. (2009).Poster session presented at caBIG 2009 Annual Meeting, Washington, D.C. |
| 2. | A Reusable Methodology for Translation and Federation of Heterogeneous Data Sources Narus S.P., Bradshaw R.L., Livne O.E., Matney S.A., Schultz D., MitchellJ.A. (2009). Poster session presented at CTSA Informatics KFC all-hands meeting, Washington, D.C. |
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| 2011 | 3 | Maximizing Data Value from Multiple Clinical Trial LaSalle B.S., Matney S., Bradshaw R.L. Poster presented at Spring AMIA Summit on Clinical Research Informatics 2011 |
| 4. | Going FURTHeR with i2b2 Narus SP, Schultz ND, Livne OE, Bradshaw RL, Mitchell JA. Poster session presented at AMIA 2011 Annual Symposium, Washington, D.C. http://proceedings.amia.org/1lqdjt/1lqdjt/1 |
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| 5. | FURTHeR Federation of Clinical Trials Bradshaw RL, LaSalle B, Narus SP. (2011). Poster session presented at AMIA 2011 Annual Symposium, Washington, D.C. Poster:sma-poster-AMIA-2011-final.pdfhttp://proceedings.amia.org/1lphfn/1lphfn/1 |
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| 2012 | 6. | Utilizing Previous Result Sets as Criteria for New Queries within FURTHeR N. Dustin Schultz, Richard L. Bradshaw, Joyce A. Mitchell Poster Session presented at 2012 SHARPn Summit Secondary Use, Rochester, MN. Poster:Previous_Results_Poster.pdf |
| 7. | Going FURTHeR with the Metadata Repository Richard L. Bradshaw, MS, Catherine J. Staes, BSN, MPH, PhD, Guilherme Del Fiol MD, PhD, Scott P. Narus, PhD, Joyce A. Mitchell, PhD; Fall 2012 Annual Symposium. Poster:AMIA-2012-FMDR-Poster-final.pdf http://proceedings.amia.org/2p9cvc/2p9cvc/1 |
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| 8. | Federating Clinical and Biospecimen Data Using FURTHeR Randy K. Madsen, BS, Richard L. Bradshaw, MS, N. Dustin Schultz, MS, Ryan Butcher, MS, Ramkiran Gouripeddi, MBBS, MS, Nathan C. Hulse, PhD, Scott P. Narus, PhD, Marc Jackson, MD, Joyce A. Mitchell, PhD; AMIA Annual Symposium 2012 Poster:rmadsen-fall-amia-poster-APO-FINAL.pdf http://proceedings.amia.org/2p9m9n/2p9m9n/1 |
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| 9. | Perfect Forward Secrecy for Patient Identifiers During Federation within FURTHeR N. Dustin Schultz, MS, Richard L. Bradshaw, MS, Scott P. Narus, PhD, Joyce A. Mitchell, PhD; AMIA Annual Symposium 2012 Poster: perfect.forward.secrecy.pdf http://proceedings.amia.org/2p9rii/2p9rii/1 |
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| 2013 | 10 | Managing Terminology for caTissue using FURTHeR’s Instance of a Robust Terminology System Ryan Butcher, MS, Randy K. Madsen, Ramkiran Gouripeddi, MBBS, MS, Aldo Bernasconi PhD, Richard Bradshaw, MS, Joyce A. Mitchell PhD; Spring AMIA 2013 Poster:Managing Terminology for caTissue using FURTHeRs Instance of a Robust Terminology System_Spring_AMIA_2013.pdf http://proceedings.amia.org/3dbd4q/3dbd4q/1 |
| 11. | FURTHeR Optimizing Meaning of Linked Data Across Coding Schemes Using a Robust Terminology Server & Standards Ryan Butcher, MS, Ramkiran Gouripeddi, MBBS, MS, Joyce A. Mitchell PhD; Spring AMIA 2013 Poster:FURTHeR Optimizing Meaning of Linked Data Across Coding Schemes Using a Robust Terminology ServerStandards_Spring_AMIA_2013.pdf http://proceedings.amia.org/3dbd31/3dbd31/1 |
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| 12. | FURTHeR: A Comparative Effectiveness Research Infrastructure for PHIS+ R. Gouripeddi, J.A. Mitchell, R. Srivastava, L. Tanzer, R. Keren, June 2013 Annual Research Meeting, Academy Health, Baltimore |
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| 13. | Automating Terminology Mappings in FURTHeR for Building Federated Databases R. Gouripeddi, P. Warner, R. Butcher, P. Mo, J.A. Mitchell, Spring AMIA 2013, Clinical Research Informatics Symposium Poster:Auto-Map_Ram.pdf http://proceedings.amia.org/3dbfa6/3dbfa6/1 |
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| 14. | Context is Everything: FURTHeR’s Contextualized Security Framework N. Dustin Schultz, MS, Richard L. Bradshaw, MS, Joyce A. Mitchell, PhD; Spring AMIA 2013, Clinical Research Informatics Symposium Poster:contextualized.security.pdf http://proceedings.amia.org/3dbee7/3dbee7/1 |
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| 15. | A Service Oriented Framework to Assess the Quality of Electronic Health Data for Clinical Research Naresh Sundar Rajan, Ramkiran Gouripeddi, Julio C. Facelli. Extended Abstract for IEEE International Conference on Healthcare Informatics 2013. |
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| 16. | FURTHeR: Integrating Environmental and Clinical Data for Clinical Research Ram Gouripeddi, Bernard A. LaSalle, Phillip B. Warner, N. Dustin Schultz, Richard L. Bradshaw, Randy Madsen, Ryan Butcher, Peter Mo, Julio C. Facelli. Air Quality, Health and Society Workshop, Friday, July 19th 2013, noon – 1:30 pm, Atrium of the James LeVoy Sorenson Molecular Biotechnology Building. University of Utah. http://www.airquality.utah.edu/air-quality-workshop-to-kickstart-collaborations/ |
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| 17. | Using Primitive Role Relationships in SNOMED to Enhance Concept Searching by Limiting Semantic Variability in FURTHeR Ryan Butcher, MS, Ramkiran Gouripeddi, MBBS, MS, Randy Madsen, BS, Julio C. Facelli PhD; Fall AMIA Annual Symposium 2013 |
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| 18. | Knowledge Driven Inclusion and Exclusion Criteria Refinement within the FURTHeR Framework Randy K. Madsen, BS, Richard L. Bradshaw, MS, N. Dustin Schultz, MS,Ryan Butcher, MS, Ramkiran Gouripeddi, MBBS, MS, Joyce A. Mitchell, PhD, Julio C. Facelli PhD; Fall AMIA Annual Symposium 2013 |
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| 19. | On the Fly Linkage of Records Containing Protected Health Information (PHI) Within the FURTHeR Framework Phillip B. Warner, Peter Mo, Dustin Schultz, Ramkiran Gouripeddi, Julio C. Facelli,; Fall AMIA Annual Symposium 2013 |
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| 20. | Going FURTHeR with Three Federated Query Types Richard L. Bradshaw, MS, N. Dustin Schultz, MS, Randy Madsen, BS, Ramkiran Gouripeddi, MBBS, MS, Ryan Butcher, MS, Bernie LaSalle, BS, Julio C. Facelli, PhD; Fall AMIA Annual Symposium 2013 |
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| 21. | Federating caTissue with FURTHeR Peter Mo, BS, Randy K. Madsen, BS, Richard L. Bradshaw, MS, N. Dustin Schultz, MS, Ryan Butcher, MS, Bernie LaSalle, BS, Ramkiran Gouripeddi, MBBS, MS, Julio C. Facelli, PhD; Fall AMIA Annual Symposium 2013 |
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| 22. | Creating a Secure, Easily Accessible Environment for PHI Data Exports within FURTHeR utilizing REDCap N. Dustin Schultz, MS, Bernard A. LaSalle, BA, Shan He, MS, Ramkiran Gouripeddi, MBBS, MS, Ryan Butcher, MS, Julio C. Facelli, PhD; Fall AMIA Annual Symposium 2013 |
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| 23 | Initial Lessons for Developing a User-Interface for Querying Federated Heterogeneous Data SourcesRamkiran Gouripeddi, Randy Madsen, Richard L. Bradshaw, N. Dustin Schultz, Ryan Butcher, Phillip B. Warner, Peter Mo, Bernard A. LaSalle, Julio C. Facelli, WISH 2013: WORKSHOP ON INTERACTIVE SYSTEMS IN HEALTHCARE 2013 | |
| 24. | OpenFurther: Federating and Generating OMOP DatasetsRamkiran Gouripeddi, N. Dustin Schultz, Ryan Butcher, Peter Mo, Richard L. Bradshaw, Randy Madsen, Phillip B. Warner, Bernard A. LaSalle, Julio C. Facelli, PhD. OMOP-IMEDS 2013 Symposium | |
| 25. | Enhanced Concept Selection Using SNOMED CT Primitives Ryan Butcher, Ramkiran Gouripeddi, Randy Madsen, Julio C. Facelli; SNOMED CT Implementation Showcase 2013. http://www.ihtsdo.org/fileadmin/user_upload/doc/showcase/show13/SnomedCtShowcase2013_Abstract_43.pdf. |
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| Presentations | ||
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| 2012 | 1. | FURTHeR (Federated Utah Research and Translational Health Electronic Repository), CTSA Toolshop Presentation, Joyce Mitchell et al, July 27, 2012, https://www.ctsacentral.org/tools/tool_shop#FURTHeR Video: https://www.ctsacentral.org/documents/tool-shop-recording-further |
| 2. | BMI Seminar Series: FURTHeR by Joyce Mitchell et. al: http://medicine.utah.edu/bmi/seminar-series/2012/fall.php | |
| 3. | PHIS+ Presentation at “Bridging the Terminology Gap in Pediatrics: Developing an Action Plan to Support the Continuum from Clinic to Research by Ram Gouripeddi available at https://custom.cvent.com/D8C8BB3C1AC948688306189D2CB33111/files/0344f97b24b84b748c0d39e3594dfb54.pdf and http://videocast.nih.gov/Summary.asp?File=17588 | |
| 2013 | 4. | Development of a Domain Analysis Model for Electronic IRB Systems: A Feasibility Study ; PhD Dissertation Defense, Shan He, May 7th, 2013Powerpoint:Shan-Defense-final.pptx |
| 5. | FURTHeR: An Infrastructure for Clinical, Translational and Comparative Effectiveness Research Ramkiran Gouripeddi, MBBS, MS, N. Dustin Schultz, MS, Richard L. Bradshaw, MS, Peter Mo, BS, Randy K. Madsen, BS, Phillip B. Warner, MS, Bernie LaSalle, BS, Julio C. Facelli, PhD. Systems Demonstration Abstract for Fall AMIA Annual Symposium 2013 Learning Objectives: FURTHeR_AIMA_2013_System_Demo_Abstract_Resubmit_Final.pdf |
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| 6. | Developing a Service Oriented Framework to Assess the Quality of Electronic Health Data for Clinical ResearchNaresh Sundar Rajan, Doctoral Consortium, IEEE International Conference on Healthcare Informatics 2013. | |
| 7. | Using SNOMED CT in Building a Database for Comparative Effectiveness Research Ramkiran Gouripeddi, MS, MBBS, Ryan Butcher, MS; Phillip B. Warner, MS, Peter Mo, MS, SNOMED CT Implementation Showcase 2013. http://www.ihtsdo.org/fileadmin/user_upload/doc/showcase/show13/SnomedCtShowcase2013_Abstract_53.pdf. Presentation Recording: Presentation Recording |
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| 2016 | 8. | An Informatics Architecture for an Exposome, R. Gouripeddi, Session II06 – Secondary Use of Data for Research (Interactive Learning), AMIA 2016 Joint Summits on Translational Science, March 22nd, 2016, San Francisco Presentation PDF: An-Informatics-Architecture-for-an-Exposome |
| Miscellaneous | ||
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| 2012 | 1. | Database helps med. research, The Daily Utah Chronicle, Volume 121, No. 100, March 8th, 2012 |